
The Hindu June 20, 2001
GENETIC MODIFICATION of crops through recombinant DNA (r-DNA) technology
has been a remarkable outcome of technological innovations in plant
breeding, a facet of human development ardently practised since the days
prehistoric man turned a settler from the nomadic hunter-gather-scavenger
that he was. Without a doubt, r-DNA technology has improved the quality of
human and animal life, has a positive impact on the environment and helps
sustain the biodiversity.
Yet, as with any technological innovation it has its share of detractors
and sceptics who prefer to cling to things they are familiar with perhaps
because they are ignorant of the new developments in science and
technology or are just plainly scared of venturing out of the beaten path.
Often such reservations give forth in the form of doomsday predictions,
scare mongering and undue haste in bundling every innovation and discovery
as unworthy. It leads to many myths and canards, which have a tendency of
self- perpetuation, based on non-science, half-truths and
misrepresentations.
When a plant breeder wants to introduce resistance to a particular fungal
pathogen to a crop species, he would scout for a variety that inherently
carried the resistance to the pathogen. Usually such donors are found in
the wild or from distant relatives that do not carry any other intrinsic
qualities of yield attributes about them. Then he would go through the
arduous process of transferring this desired trait onto the cultivated
species through crossing once with the donor and then repeated
back-crossing of the progeny generations with the cultivated species in an
effort to capture the desired trait without dragging down the other
favourable attributes of the cultivated species already present in it.
This translates into a numbers game: the more the crosses made and the
more the progeny screened the better the opportunity of striking the
desired combination of disease resistance plus favourable attributes
already present in the cultivated species.
What is happening here is that the genes of the two species are mixed up
during the process of sexual reproduction and they get reassorted in the
progeny in a myriad of permutations and combinations. The trick is to be
able to pick one winner among a million or more! Recombinant DNA
technology assists in identifying the specific gene(s) conferring the
resistance trait and helps splice it onto the genome of the recipient with
clinical precision and without having to rehash the whole genome of the
recipient. What is more, unlike classical breeding which circumscribes to
barriers to gene transfer, r-DNA circumvents it and facilitates transfer
of genes across kingdoms. In either event, genes have been shuffled into
genomes of cultivated species, save that in classical breeding there are
many operational constraints, besides being a very drawn out process and
progress is slow whereas the modern method is more precise, obviates the
familiar barriers but is more expensive besides being now hemmed in by
restrictions imposed by intellectual property rights.
A natural phenomenon
In nature genes have been transferred from and between organisms without
discrimination and this has been happening over epochs. There are
innumerable studies that show similarities between natural horizontal gene
transfer (HGT) and natural DNA rearrangements and those used in laboratory
experiments. It is common knowledge that genes move around many microbes.
Microbial gene transfer is a well-documented means of exchange of loci
among many prokaryotes and some eukaryotes (Paul, JH, 1999, J. Mol
Microbiol Biotechnol). A transduction-like mechanism of transfer from
viral-like particles produced by marine bacteria and thermal spring
bacteria to Escherichia coli has been documented indicating that broad
host range transduction may be occurring in aquatic environments. The
sequencing of complete microbial genomes has further shown them to be a
mosaic tapestry comprising ancestral chromosomal genes interspersed with
recently transferred operons that encode for peripheral functions. Genomes
of ancient species include genes for replication, transcription and
translation that are eukaryotic in complexity while the genes for
intermediary metabolism are bacterial in nature. Moreover, in eukaryotes,
bacterial genes, believed to have been derived from food sources, have
replaced many ancestral eukaryotic genes. Together, these results indicate
that microbial sex results in the dispersal of loci in contemporary
microbial populations.
Gene movements in insects has been comprehensively reviewed documenting
extensive similarities of nature to lab genetic engineering by Robertson
and Lampe (1995, Ann Rev Ent).
Likewise in plants, R. A. Emerson was the first to document red- white
segments in `Calico' corn (Emerson, 1914, Am Nat) which was later shown by
Brink and Nilan (1952, Genetics) to be the phenomenon established by
Barbara McClintock as ``Controlling Elements'' (1945, Carnegie Inst Wash
Year Book). Since then, ``Controlling Elements'', ``Mobile Elements'' or
``Transposable Elements'' as they are called have been researched
extensively for their genetics and characterised at the molecular level by
numerous researchers including this author (Natarajan, 1987, Iowa State
University). These mobile transposable elements (TEs) have been shown to
exist in multiple families with autonomous and non- autonomous members,
move within and between chromosomes, disrupt gene function, cause target
site duplications and multiply. TEs can exist in a genome in a quiescent
state and can be activated by biotic or abiotic stresses that have been
collectively termed as ``genomic stress''. What is more, TEs have been
found in every plant taxon investigated thus far.
There are two recent publications that have raised the horizon of our
understanding of the dynamic role of these TEs in the plasticity of
eukaryotic genomes. SanMiguel and his collegues have reported (1998, Nat
Genet) evidence of retrotransposon activity in doubling the size of the
maize genome within the past 3 million years, demonstrating the active
role of such elements in restructing a genome. The other, Kalendar et al
(2000, PNAS, USA) illustrate a genome size variation due to
retrotransposon amplification and intra-element deletion.
At another plane, horizontal gene transfer (HGT) in nature into plants
from a soil bacterium Agrobacterium tumefaciens is well documented (Fraley
et al, 1983, PNAS, USA) and is a popular technique adopted by scientists
to introduce many desired genes into plants. In fact, 17 human disease
genes ranging from hyper- insularism to heredity deafness, fam cardiac
myopathy, myotonic dystrophy have high levels of similarity to the genes
discovered in Arabidopsis thaliana, a crucifer. In addition, 37 per cent
of the human genome is composed of virus-like foreign DNA!
Thus, in all three kingdoms - microbe, plant and animal - a whole range of
changes such as additions, duplications, deletions, mutations,
modification, activation and silencing of genetic material has been
regularly occurring in a random manner and in a ``foreign'' environment
over the millennia mediated by and actively engaged in by viruses,
retroviruses, bacteria, plasmids, phages, transposable elements and
extra-nuclear genomes.
The plasticity of the genome has been established in every organism
examined. In fact, it would seem that the genome's integrity is indeed
sustained, aided and enhanced by such dynamism in a changing milieu
spanning different epochs.
Other myths
One of the many myths floating around is that some of the products of
r-DNA technology as the glyphosate-based herbicide is toxic to animals and
humans. The science of the matter is that glyphosate is non-toxic to
mammals and fishes. In fact it gets bound on contact with soil components
and is rapidly degraded by soil microorganisms, leaving little or no
residue (Wilkins, 2000, Critical Rev Plant Sci); what is more, there is no
known case of reported herbicide resistance to this product. Likewise,
that Bt- mediated resistance to insects conferred upon corn and cotton are
destructive to monarch butterflies that feed on the pollen of genetically
engineered plants. Nothing can be farther from the truth and empirical
data in peer-reviewed publications have shown that r-DNA technology does
not harm the environment or cause risk to the biodiversity but on the
contrary, aids and promotes the reduction of toxic wastes that would
otherwise be generated from massive application of pesticides and
herbicides to protect the crops.
Marker genes
The use of marker genes of r-DNA work has been marauded by the ignorant
with claims that they are antibiotic-resistant genes and that this creates
the spread of antibiotic resistance to all organisms that come in contact
with the transgene. There is no scientific evidence for the occurrence of
direct gene transfer of DNA present in the transgenic crop or food to
humans, animals or microbes including those from the gastrointestinal
tracts of animals to its microflora. This is so because, the half-life of
plant genomic DNA is extremely short. In the case of genetically
engineered corn leaf fed to a cow, the low pH and degradative enzymes in
the ensilation process would result in rapid DNA degradation. DNA not
degraded to single strands prior to consumption would be subject to the
harsh degradative environment in the gut and rumen. It has been clearly
established (Ausubel, 1987, Wiley and Sons) that plant cells inherently
have an abundance of highly active nucleuses that will digest plant DNA
upon cell lysis during mastication and the process of digestion. In lab
experiments to isolate plant DNA, the integrity of plant DNA can be
ensured only through adding protein denaturing agents, without which all
DNA will be degraded to fragments of less than 500 base pairs. Neither
ruminants nor humans produce such stabilising agents in their stomachs.
Few, if any, DNA that escape the above steps of degradation would be
subject to digestion by the extra-cellular nucleuses from ruminal and gut
bacteria (McAllan, 1980, Brit J of Nutrition). The action of intracellular
restriction endonucleases which are common in ruminal bacteria would be a
further deterrent to intact DNA (Morrison, 1996).
Frequently concerns are expressed in the popular press about food security
and the propriety in adopting r-DNA technology to address these issues. A
brief review of some of the fundamental approaches adopted by researchers
that help us feed a hungry world comprising over 6 billion inhabitants
today would be pertinent here. The fact is that from among a pool of
250,000 flowering plants, only a hundred or so are intensely cultivated
and a limited number among them provide all the energy and nutrients. From
prehistoric days until today, plants have been transformed and rendered
useful through a process of selection from among the variants. Along the
way several transformations took place, prominent ones being determinate
growth habit, elimination of shattering of grains/seeds, reduced growing
cycle, uniform maturity, enhanced fruit size, increased grain output,
resistance to pests, diseases and drought/flooding and so on.
Consider the ancestral marble sized, terribly bitter and poisonous
Lycopersicon that has given rise to the now familiar dainty and succulent
tomato and the transformations that this species has undergone through
human intervention to get a perspective of the processes involved in
creating a useful plant product. The narrow pool of native genetic
diversity is perpetually augmented in nature by mutations (brought about
by horizontal gene transfer), hybridisations and selections. Plant
breeders add to these variations by using ionising radiation, mutagenic
chemicals or cell culture. The more the variations, the better the
prospects of pyramiding useful traits into a cultivated variety. Since no
single plant carries all the desirable traits, in traditional plant
breeding, crosses are made between two parents to bring about useful
traits in the progeny followed by selection. However, the process meant
mixing of thousands of genes, as it were, between the two parents.
However, modern r-DNA technology achieves the same in a very precise
manner by inserting only one or two genes at a time. Thus, the new
technology is no different from the classical one save that it is more
precise, more accurate and importantly, puts together more traits in a
desired plant than was hitherto possible due to restrictions imposed by
sexual incompatibility of species or intransigence of cells and tissues
when cultured.
It is further well documented that integration of genes and whole genomes
have taken place in nature to result in useful plant species, prominent
examples being the modern bread wheat, Triticale, nectarine and so on. In
agriculture, plant breeders have been moving genes from one species to
another for a very a long time through sexual crosses, often using
``bridging'' species. In wheat and rice, for example, many disease
resistance traits were introduced from ``alien'' species (Khush and
Toenniessen, 1991, Biotechnology in Agriculture, Wallingford). Using modem
biotechnology, plants have been made more resistant to insects, bacteria,
fungi, and viruses, all of which lead to global production losses of well
over 35 per cent estimated at over US$ 200 billions annually (Krattiger
1997, ISAAA Briefs 2). Food quality enhancement by reducing certain
enzymes in fruits and perishable vegetables reduces their perishability
and significantly cuts post-harvest losses (Neupane et al 1998, in: Acta
Horticulturae, Brisbane, Ed. R. A. Drew). Further, certain naturally
occurring substances in plants can be increased such as anticancer
compounds naturally found in soybeans (Wang and Wixon 1999, INFORM),
vitamin A in rice (Burkhardt et al 1997, Pl Journal), iron content in
cereals (Theil et al 1997, Eur J Cli Nutr), or more non-saturated fatty
acids in canola (Kramer and Sauer 1993, Scan J Nutr), and other oil crops.
Plants can also be used to deliver edible vaccines, which would have a
tremendous impact in developing countries.
In conclusion
In the past 15 years of intensive governmental, academic and commercial
scrutiny, not a single incidence of actual harm to human or animal health,
safety or the environment has ever been documented concerning the approved
crops or the health-care products on the market today. Does this
tantamount to a zero risk situation? Absolutely not. Zero does not exist
in terms of risk. But, what is the evidence of adverse effects? Absolutely
none.
Like any technology, r-DNA technology carries with it many advantages and
some perceived risks. The challenge would be to manage the risks in order
to maximise the advantages. A judicious combination of the best of science
and due caution, tempered by transparency and enabling systems are key
ingredients to harnessing the benefits of this technology for the large
good of mankind.
Dr. GURUMURTI NATARAJAN ** NOTICE: In accordance with Title 17 U.S.C. Section 107, this material is distributed for research and educational purposes only. ** |
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